miRBase entry: cja-mir-652a

Stem-loop cja-mir-652a


Accession
MI0031872
Description
Callithrix jacchus cja-mir-652a precursor miRNA


Sequence

ggcuaugcacugcacaacccuaggagagggugccauucacauagacuauaauugAAUGGCGCCACUAGGGUUGUGcagugcacaacc
((...((((((((((((((((((.....(((((((((((..((.....))..))))))))))).))))))))))))))))))...))

Structure
  cua                  gagag           ca  g 
gg   ugcacugcacaacccuag     ggugccauuca  ua a
||   ||||||||||||||||||     |||||||||||  || c
cc   acgugacGUGUUGGGAUC     CCGCGGUAAgu  au u
  aac                  ----A           ua  a 


Annotation confidence Not enough data
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Genome context
chrX: 98589903-98589989 [+]

Database links

Mature cja-miR-652a

Accession MIMAT0039358
Description Callithrix jacchus cja-miR-652a mature miRNA
Sequence 55 - AAUGGCGCCACUAGGGUUGUG - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857