miRBase entry: cja-mir-363

Stem-loop cja-mir-363

Accession

MI0031873

Description

Callithrix jacchus cja-mir-363 precursor miRNA

Sequence

guucugauauuuaggcauuguaaaaugaucuguuuugcuguugucggguggaucacgaugcaauuuugauuaguaucauaggagaaaAAUUGCACGGUAUCCAUCUGUAaaccgcaggaccuuuguuggcgacauuccucaucagcac
............(((((((....)))).)))(((((((.(((..(((((((((..((.(((((((((..(((......)))....)))))))))))..)))))))))..))).)))))))...((((((.((......)).)))))).

Structure

guucugauauuuaggcauuguaaaaugaucu       u   gu         ca  a         --ga   gu 
                               guuuugc guu  cggguggau  cg ugcaauuuu    uua  a
                               ||||||| |||  |||||||||  || |||||||||    |||   
                               caggacg caa  GUCUACCUA  GC ACGUUAAaa    gau  u
---cacgacuacuccuuacagcgguuguuuc       c   AU         UG  -         agag   ac

Annotation confidence Not enough data

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Genome context

chrX: 122081718-122081865 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from cja-mir-363

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-363

Accession	MIMAT0039359
Description	Callithrix jacchus cja-miR-363 mature miRNA
Sequence	88 - AAUUGCACGGUAUCCAUCUGUA - 109
Evidence	experimental Illumina [1-2]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857

PubMed ID: 28640911
Evolution of microRNA in primates
McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
PLoS One (2017) 12:e0176596