miRBase entry: cja-mir-9904

Stem-loop cja-mir-9904


Accession
MI0031880
Description
Callithrix jacchus cja-mir-9904 precursor miRNA


Sequence

uugcaggcagccgACUGAAAUUGUAGACUCGGACAagacgcgacaagcggccgcccgaggcuacaacuucagcgggguggccugacaa
.(((((((..(((.(((((.((((((.(((((.(....(((.....)))...).))))).)))))).))))))))....))))).)).

Structure
u  -     --ag   A     A      A     A Aaga   g 
 ug caggc    ccg CUGAA UUGUAG CUCGG C    cgc a
 || |||||    ||| ||||| |||||| ||||| |    ||| c
 ac guccg    ggc gacuu aacauc gagcc g    gcg a
a  a     gugg   -     c      g     c -ccg   a 


Annotation confidence Not enough data
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Genome context
chr7: 102655571-102655658 [-]

Database links

Mature cja-miR-9904

Accession MIMAT0039365
Description Callithrix jacchus cja-miR-9904 mature miRNA
Sequence 14 - ACUGAAAUUGUAGACUCGGACA - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857