Stem-loop cja-mir-222-1

Accession

MI0031888

Description

Callithrix jacchus cja-mir-222-1 precursor miRNA

Sequence

gcugccagaagguguggguacccucaauggcucaguagccaguguagauccugucuuuuguaaucaguAGCUACAUCUGGCUACUGGGUCUcugauggcaucuuuuagcuucugcuucagu
((((.((((((.((.((((.((.(((..(((((((((((((((((((...(((...........)))...))))).))))))))))))))..))).)).))))..)).))))))...))))

Structure

    --c      g  -u    a  c   au              -     auc   ucuu 
gcug   cagaag ug  gggu cc uca  ggcucaguagccag uguag   cug    u
||||   |||||| ||  |||| || |||  |||||||||||||| |||||   |||    u
ugac   gucuuc au  ucua gg agu  CUGGGUCAUCGGUC ACAUC   gac    g
    uuc      g  uu    c  u   cU              U     GAu   uaau 

Annotation confidence Not enough data

Genome context

chrX: 44698721-44698841 [-]

Mature cja-miR-222

• Accession: MIMAT0039370
• Description: Callithrix jacchus cja-miR-222 mature miRNA
• Sequence: 69 - AGCUACAUCUGGCUACUGGGUCU - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596