Stem-loop cja-mir-34c

Accession

MI0031891

Description

Callithrix jacchus cja-mir-34c precursor miRNA

Sequence

gagucuaguuacuAGGCAGUGUAGUUAGCUGAUUGCuaauaguaccaaucacuaaccacacggccagguaaaaagauuu
((((((..(((((.(((.((((.(((((.((((((.((....)).))))))))))).)))).))).)))))..))))))

Structure

      ag     A   A    A     C      C  a 
gagucu  uuacu GGC GUGU GUUAG UGAUUG ua u
||||||  ||||| ||| |||| ||||| |||||| ||  
uuuaga  aaugg ccg caca caauc acuaac au a
      aa     a   g    c     -      c  g 

Annotation confidence Not enough data

Genome context

chr11: 9010001-9010079 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-34c

Mature cja-miR-34c

• Accession: MIMAT0039373
• Description: Callithrix jacchus cja-miR-34c mature miRNA
• Sequence: 14 - AGGCAGUGUAGUUAGCUGAUUGC - 36
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596