miRBase entry: cja-mir-655

Stem-loop cja-mir-655


Accession
MI0031894
Description
Callithrix jacchus cja-mir-655 precursor miRNA


Sequence

gaggauauuugaggagagguuauccguguuauguucgcuucauucgucaugaAUAAUACAUGGUUAACCUCUUUuugaauaucagacuc
...(((((((((((((((((((.((((((..((((((...(....)...))))))..)))))).)))))))))))))))))))......

Structure
---gag                   u      ua      cuu a 
      gauauuugaggagagguua ccgugu  uguucg   c u
      ||||||||||||||||||| ||||||  ||||||   |  
      cuauaaguuUUUCUCCAAU GGUACA  AUAagu   g u
cucaga                   U      UA      acu c 


Annotation confidence Not enough data
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Genome context
chr10: 126966930-126967018 [+]
Clustered miRNAs
16 other miRNAs are < 10 kb from cja-mir-655
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-655

Accession MIMAT0039376
Description Callithrix jacchus cja-miR-655 mature miRNA
Sequence 53 - AUAAUACAUGGUUAACCUCUUU - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857