miRBase entry: cja-mir-376a-1

Stem-loop cja-mir-376a-1

Accession

MI0031900

Description

Callithrix jacchus cja-mir-376a-1 precursor miRNA

Sequence

uggaagccuucuuugguauuuaaaagGUAGAUUCUCCUUCUAUGAGUacauuauuuaugauuaAUCAUAGAGGAAAAUCCACGUuuucaguaucaaaugcugcuuuga
..(((((....(((((((((.((((.((.((((.((((.((((((...(((.....))).....)))))))))).)))).)).)))).)))))))))....)))))..

Structure

ug     cuuc         u    g  A    C    U      --GUa   u 
  gaagc    uuugguauu aaaa GU GAUU UCCU CUAUGA     cau a
  |||||    ||||||||| |||| || |||| |||| ||||||     ||| u
  uuucg    aaacuauga uuuU CA CUAA AGGA GAUACU     gua u
ag     ucgu         c    G  C    A    -      Aauua   u

Annotation confidence Not enough data

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Genome context

chr10: 126958022-126958129 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from cja-mir-376a-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-376a-5p

Accession	MIMAT0039382
Description	Callithrix jacchus cja-miR-376a-5p mature miRNA
Sequence	27 - GUAGAUUCUCCUUCUAUGAGU - 47
Evidence	experimental Illumina [1]

Mature cja-miR-376a-3p

Accession	MIMAT0039383
Description	Callithrix jacchus cja-miR-376a-3p mature miRNA
Sequence	64 - AUCAUAGAGGAAAAUCCACGU - 84
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857