Stem-loop cja-mir-224

Accession

MI0031912

Description

Callithrix jacchus cja-mir-224 precursor miRNA

Sequence

gauaaggcccaggggcuuuCAAGUCACUAGUGGUUCCAUUUaguagaugguugugcauuguuucaaaauggugcccuagugacuacaaagccccagagccaguauc
((((.(((.(.((((((((..(((((((((.(((.((((((.(..((((......))))....).)))))).))))))))))))..)))))))).).)))..))))

Structure

    -a   c a        CA         U   U      a --ua    gu 
gaua  ggc c ggggcuuu  AGUCACUAG GGU CCAUUU g    gaug  u
||||  ||| | ||||||||  ||||||||| ||| |||||| |    ||||   
cuau  ccg g ccccgaaa  ucagugauc ccg gguaaa c    uuac  g
    ga   a a        ca         -   u      a uuug    gu 

Annotation confidence Not enough data

Genome context

chrX: 138902525-138902630 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cja-mir-224

Mature cja-miR-224

• Accession: MIMAT0039393
• Description: Callithrix jacchus cja-miR-224 mature miRNA
• Sequence: 20 - CAAGUCACUAGUGGUUCCAUUU - 41
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596