Stem-loop cja-mir-3120

Accession

MI0031914

Description

Callithrix jacchus cja-mir-3120 precursor miRNA

Sequence

ggcuggguugucaugugacugccugucugugccugcuguacaggugagcggauguucugCACAGCAAGUGUAGACAGGCAGacacaugacaacucuguccagcc
(((((((((((((((((.((((((((((((((.((((((.((((...........)))).)))))).)))))))))))))).))))))))))).....))))))

Structure

      -----           a              c      a    ugag 
ggcugg     guugucaugug cugccugucugugc ugcugu cagg    c
||||||     ||||||||||| |||||||||||||| |||||| ||||    g
ccgacc     caacaguacac GACGGACAGAUGUG ACGACA gucu    g
      ugucu           a              A      C    ugua 

Annotation confidence Not enough data

Genome context

chr18: 34524089-34524192 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-3120

Mature cja-miR-3120

• Accession: MIMAT0039395
• Description: Callithrix jacchus cja-miR-3120 mature miRNA
• Sequence: 60 - CACAGCAAGUGUAGACAGGCAG - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857