miRBase entry: cja-mir-532

Stem-loop cja-mir-532


Accession
MI0031918
Description
Callithrix jacchus cja-mir-532 precursor miRNA


Sequence

gcuuucucuccucCAUGCCUUGAGUGUAGGACCGUuggcaucuuaauuacccucccacacccaaggcuugcagaagagcgagc
((((.((((.((.((.((((((.((((.(((..((.............))..))).)))).)))))).)).)).)))).))))

Structure
    u    c  c  U      A    A   CC  uggca 
gcuu cucu cu CA GCCUUG GUGU GGA  GU     u
|||| |||| || || |||||| |||| |||  ||     c
cgag gaga ga gu cggaac caca ccu  ca     u
    c    a  c  u      c    c   cc  uuaau 


Annotation confidence Not enough data
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Genome context
chrX: 48476376-48476458 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cja-mir-532
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-532

Accession MIMAT0039399
Description Callithrix jacchus cja-miR-532 mature miRNA
Sequence 14 - CAUGCCUUGAGUGUAGGACCGU - 35
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857

  2. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596