miRBase entry: cja-mir-323

Stem-loop cja-mir-323


Accession
MI0031920
Description
Callithrix jacchus cja-mir-323 precursor miRNA


Sequence

ucggagggagguuguccguggugaguucgcauuacuuaaugaugCCCAAUACACGGUCGACCUCUcuucgg
.(((((((((((((.(((((........((((((.....))))))......))))).))))))))))))).

Structure
u             u     gugaguuc      c 
 cggagggagguug ccgug        gcauua u
 ||||||||||||| |||||        |||||| u
 gcuucUCUCCAGC GGCAC        Cguagu a
g             U     --AUAACC      a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr10: 126973565-126973635 [+]
Clustered miRNAs
13 other miRNAs are < 10 kb from cja-mir-323
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-323

Accession MIMAT0039401
Description Callithrix jacchus cja-miR-323 mature miRNA
Sequence 45 - CCCAAUACACGGUCGACCUCU - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857