Stem-loop cja-mir-382

Accession

MI0031929

Description

Callithrix jacchus cja-mir-382 precursor miRNA

Sequence

gccgugguacuugaagaGAAGUUGUUCGUGGUGGAUUCGcuuuacuuaugacgaaucauucacggacaacacuuuuuucaguaccaaaugc
....(((((((.(((((((.(((((((((((..(((((((.........).))))))..)))))))))))..)))))))))))))).....

Structure

-gccg       u       -A           UG      - uuu 
     ugguacu gaagaGA  GUUGUUCGUGG  GAUUCG c   a
     ||||||| |||||||  |||||||||||  |||||| |   c
     accauga cuuuuuu  caacaggcacu  cuaagc g   u
cguaa       -       ca           ua      a uau 

Annotation confidence Not enough data

Genome context

chr10: 126971650-126971740 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from cja-mir-382

Mature cja-miR-382

• Accession: MIMAT0039409
• Description: Callithrix jacchus cja-miR-382 mature miRNA
• Sequence: 18 - GAAGUUGUUCGUGGUGGAUUCG - 39
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857