miRBase entry: cja-mir-144

Stem-loop cja-mir-144


Accession
MI0031933
Description
Callithrix jacchus cja-mir-144 precursor miRNA


Sequence

ggggcccuggcugGGAUAUCAUCAUAUACUGUAAGuuugcgaugagacacuacaguauagaugauguacuagucugggcaccc
(((((((.((((((.((((((((.(((((((((.((((......))))..))))))))))))))))).)))))).)))).)))

Structure
   -    u      G        A         -A    gc 
ggg gccc ggcugG AUAUCAUC UAUACUGUA  Guuu  g
||| |||| |||||| |||||||| |||||||||  ||||   
ccc cggg cugauc uguaguag auaugacau  caga  a
   a    u      a        -         ca    gu 


Annotation confidence Not enough data
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Genome context
chr5: 95230319-95230401 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cja-mir-144
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-144

Accession MIMAT0039413
Description Callithrix jacchus cja-miR-144 mature miRNA
Sequence 14 - GGAUAUCAUCAUAUACUGUAAG - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857