Stem-loop cja-mir-145

Accession

MI0031934

Description

Callithrix jacchus cja-mir-145 precursor miRNA

Sequence

accuuguccucacgGUCCAGUUUUCCCAGGAAUCCCUuagaugcuaagacggggauuccuggaaauacuguucuugaggucauggu
(((.((.(((((.((..((((.((.(((((((((((((((...)))....)))))))))))).)).))))..))))))).)).)))

Structure

   u  u     c  UC    U  C            ----   a 
acc ug ccuca gG  CAGU UU CCAGGAAUCCCU    uag  
||| || ||||| ||  |||| || ||||||||||||    ||| u
ugg ac ggagu uc  guca aa gguccuuagggg    auc  
   u  u     -  uu    u  a            caga   g 

Annotation confidence Not enough data

Genome context

chr2: 46852888-46852973 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-145

Mature cja-miR-145

• Accession: MIMAT0039414
• Description: Callithrix jacchus cja-miR-145 mature miRNA
• Sequence: 15 - GUCCAGUUUUCCCAGGAAUCCCU - 37
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596