Stem-loop cja-mir-660

Accession

MI0031953

Description

Callithrix jacchus cja-mir-660 precursor miRNA

Sequence

gcuccuucucccaUACCCAUUGCAUAUCGGAGUUGugaauucucaaaacaccuccugugugcauggauuacaggagggugagc
((((.((((((.....((((.((((((.((((.(((...........))).)))).))))))))))......)))))).))))

Structure

    c      -caUAC    U      C    U   gaau 
gcuc uucucc      CCAU GCAUAU GGAG UGu    u
|||| ||||||      |||| |||||| |||| |||    c
cgag gggagg      ggua cgugug ccuc aca    u
    u      acauua    -      u    c   aaac 

Annotation confidence Not enough data

Genome context

chrX: 48489441-48489523 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-660

Mature cja-miR-660

• Accession: MIMAT0039432
• Description: Callithrix jacchus cja-miR-660 mature miRNA
• Sequence: 14 - UACCCAUUGCAUAUCGGAGUUG - 35
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596