miRBase entry: cja-mir-10b

Stem-loop cja-mir-10b


Accession
MI0031954
Description
Callithrix jacchus cja-mir-10b precursor miRNA


Sequence

gggacccagagguuguaacguugucuauauaUACCCUGUAGAACCGAAUUUGUgugguauccauauagucacagauucgauucuaggggaauauauggucgaugcaaaaacuucacguuuc
(((((...((((((....(((((.((((((((.((((.(((((.((((((((((.(.(((....))).))))))))))).))))))))).)))))))).)))))....))))))..)))))

Structure
     cca      guaa     u        A    G     C          u g   c 
gggac   gagguu    cguug cuauauaU CCCU UAGAA CGAAUUUGUg g uau c
|||||   ||||||    ||||| |||||||| |||| ||||| |||||||||| | |||  
cuuug   cuucaa    guagc gguauaua gggg aucuu gcuuagacac u aua a
     -ca      aaac     u        a    -     a          - g   u 


Annotation confidence Not enough data
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Genome context
chr6: 42186363-42186483 [-]

Database links

Mature cja-miR-10b

Accession MIMAT0039433
Description Callithrix jacchus cja-miR-10b mature miRNA
Sequence 32 - UACCCUGUAGAACCGAAUUUGU - 53
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857

  2. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596