miRBase entry: cja-mir-29b-1

Stem-loop cja-mir-29b-1

Accession

MI0031958

Description

Callithrix jacchus cja-mir-29b-1 precursor miRNA

Sequence

ucuucuucuggaagcugguuucacaugguggcuuagauuuuuccaucuuuguaucUAGCACCAUUUGAAAUCAGUGUUuuaggaguaaga
(((((((((((((((((((((((.((((((.((.((((..............)))))))))))).)))))))))).))))))))).))))

Structure

    -         -          c      g  u    uuuucc 
ucuu cuucuggaa gcugguuuca auggug cu agau      a
|||| ||||||||| |||||||||| |||||| || ||||       
agaa gaggauuUU UGACUAAAGU UACCAC GA Ucua      u
    u         G          U      -  -    uguuuc

Annotation confidence Not enough data

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Genome context

chr19: 29756437-29756526 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-29b-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-29b

Accession	MIMAT0039437
Description	Callithrix jacchus cja-miR-29b mature miRNA
Sequence	56 - UAGCACCAUUUGAAAUCAGUGUU - 78
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857