miRBase entry: cja-mir-29c

Stem-loop cja-mir-29c

Accession

MI0031960

Description

Callithrix jacchus cja-mir-29c precursor miRNA

Sequence

ucucuuacacaggcugaccgauuucuccugguguucagagucuguuuuugucUAGCACCAUUUGAAAUCGGUUaugauguaggggg
.((((((((((...(((((((((((...(((((((.(((...........))))))))))...))))))))))))).)))))))).

Structure

u        -  ggc           ucc       c   gucu 
 cucuuaca ca   ugaccgauuuc   ugguguu aga    g
 |||||||| ||   |||||||||||   ||||||| |||    u
 ggggaugu gu   aUUGGCUAAAG   ACCACGA Ucu    u
g        a  ---           UUU       -   guuu

Annotation confidence Not enough data

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Genome context

chr19: 29755856-29755941 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-29c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-29c

Accession	MIMAT0039438
Description	Callithrix jacchus cja-miR-29c mature miRNA
Sequence	53 - UAGCACCAUUUGAAAUCGGUU - 73
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857