miRBase entry: cja-mir-449c

Stem-loop cja-mir-449c

Accession

MI0031965

Description

Callithrix jacchus cja-mir-449c precursor miRNA

Sequence

gugucaggUAGGCAGUGUAUUGCUAGCGGCUguuaauaauuuuaacaguugcugguugcacucccuucuguugc
((..((((.(((.((((((..(((((((((((((((.....))))))))))))))))))))).)))))))..))

Structure

  gu    U   C      UU               u 
gu  cagg AGG AGUGUA  GCUAGCGGCUguuaa a
||  |||| ||| ||||||  ||||||||||||||| a
cg  gucu ucc ucacgu  uggucguugacaauu u
  uu    -   c      --               u

Annotation confidence Not enough data

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Genome context

chr2: 152552514-152552587 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-449c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-449c

Accession	MIMAT0039442
Description	Callithrix jacchus cja-miR-449c mature miRNA
Sequence	9 - UAGGCAGUGUAUUGCUAGCGGCU - 31
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857