Stem-loop cja-mir-196a

Accession

MI0031966

Description

Callithrix jacchus cja-mir-196a precursor miRNA

Sequence

ggaacugcugagugaauUAGGUAGUUUCAUGUUGUUGGgccuggguuucugaacacaacaacaucaaaccacccgauucacggcaguuacu
..(((((((..(((((((.(((.((((.((((((((((..(.........)..).))))))))).)))).))).))))))))))))))...

Structure

-gg       ga       A   A    C         - gc ugg 
   aacugcu  gugaauU GGU GUUU AUGUUGUUG G  c   g
   |||||||  ||||||| ||| |||| ||||||||| |  |   u
   uugacgg  cacuuag cca caaa uacaacaac c  g   u
uca       --       c   c    c         a aa ucu 

Annotation confidence Not enough data

Genome context

chr5: 108924757-108924847 [+]

Mature cja-miR-196a

• Accession: MIMAT0039443
• Description: Callithrix jacchus cja-miR-196a mature miRNA
• Sequence: 18 - UAGGUAGUUUCAUGUUGUUGG - 38
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596