Stem-loop cja-mir-381

Accession

MI0031969

Description

Callithrix jacchus cja-mir-381 precursor miRNA

Sequence

guuugguacuuaaagcgagguugcccuuuguauauucgguuuauugacaugcaaUAUACAAGGGCAAGCUCUCUGUgaguaucaaac
((((((((((((.((.(((.((((((((.((((((((((((....))).)).))))))))))))))).))).)).))))))))))))

Structure

            a  c   g        u       -  -   u 
guuugguacuua ag gag uugcccuu guauauu cg guu a
|||||||||||| || ||| |||||||| ||||||| || |||  
caaacuaugagU UC CUC AACGGGAA CAUAUaa gu cag u
            G  U   G        -       c  a   u 

Annotation confidence Not enough data

Genome context

chr10: 126963292-126963378 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from cja-mir-381

Mature cja-miR-381

• Accession: MIMAT0039446
• Description: Callithrix jacchus cja-miR-381 mature miRNA
• Sequence: 55 - UAUACAAGGGCAAGCUCUCUGU - 76
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596