Stem-loop cja-mir-183

Accession

MI0031971

Description

Callithrix jacchus cja-mir-183 precursor miRNA

Sequence

ugacuccuguucugugUAUGGCACUGGUAGAAUUCACUgugaacagucucagucagugaauuaccgaagggccauaaacagagcagagaca
....(((((((((((.((((((.((((((..(((((((((((......)))..))))))))))))..)).)))))).))))))))).))..

Structure

ugac  -         g      A  --    GA        --   ac 
    uc cuguucugu UAUGGC CU  GGUA  AUUCACUg  uga  a
    || ||||||||| |||||| ||  ||||  ||||||||  |||   
    ag gacgagaca auaccg ga  ccau  uaagugac  acu  g
--ac  a         a      g  ag    --        ug   cu 

Annotation confidence Not enough data

Genome context

chr8: 116491525-116491615 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from cja-mir-183

Mature cja-miR-183

• Accession: MIMAT0039448
• Description: Callithrix jacchus cja-miR-183 mature miRNA
• Sequence: 17 - UAUGGCACUGGUAGAAUUCACU - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857