Stem-loop cja-mir-654

Accession

MI0031973

Description

Callithrix jacchus cja-mir-654 precursor miRNA

Sequence

aaaggugguggaccgcagaacaugugcugaguucgugccaUAUGUCUGCUGACCAUCACCuuu
(((((((((((.(.(((((.(((((((.........).))))))))))).).)))))))))))

Structure

           a c     a      - uga 
aaagguggugg c gcaga caugug c   g
||||||||||| | ||||| |||||| |   u
uuuCCACUACC G CGUCU GUAUac g   u
           A U     -      c ugc 

Annotation confidence Not enough data

Genome context

chr10: 126957505-126957567 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from cja-mir-654

Mature cja-miR-654

• Accession: MIMAT0039450
• Description: Callithrix jacchus cja-miR-654 mature miRNA
• Sequence: 41 - UAUGUCUGCUGACCAUCACC - 60
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596