miRBase entry: cja-mir-148b

Stem-loop cja-mir-148b


Accession
MI0031986
Description
Callithrix jacchus cja-mir-148b precursor miRNA


Sequence

agcacuauuagcauuugaggugaaguucuguuuuacacucaggcuguggcucucugaaagUCAGUGCAUCACAGAACUUUGUcucgaaagcuuucuagcagcu
(((.(((..(((.((((((((((((((((((..(.((((..((((.............)))))))).)..)))))))))))))))))).)))...)))..)))

Structure
   -a   -uu   a                  uu a    ca    guggc 
agc  cua   agc uuugaggugaaguucugu  u cacu  ggcu     u
|||  |||   ||| ||||||||||||||||||  | ||||  ||||     c
ucg  gau   ucg aagcucUGUUUCAAGACA  A GUGA  CUga     u
   ac   cuu   a                  CU C    --    aaguc 


Annotation confidence Not enough data
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Genome context
chr9: 43282722-43282824 [+]

Database links

Mature cja-miR-148b

Accession MIMAT0039462
Description Callithrix jacchus cja-miR-148b mature miRNA
Sequence 61 - UCAGUGCAUCACAGAACUUUGU - 82
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857

  2. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596