Stem-loop cja-mir-615

Accession

MI0031990

Description

Callithrix jacchus cja-mir-615 precursor miRNA

Sequence

cgcucgcggcuccggaggauuccagcgacucgggaggggcgggagggggguccccggugcucggaucucgagggugcuuauuguucggUCCGAGCCUGGGUCUCCCUCUUccccccaacccccccucagccccuccggcugcagagug
((((((((((..((((((......((((...(((..(((.((((((((((..(((((.((((((((..((((.(.......).)))))))))))))))))...)))))))))))))..)))....)).)).))))))))))).)))))

Structure

     -     uc      auucca  -  -cuc   ag   c          -uc     u        cu    g ug 
cgcuc gcggc  cggagg      gc ga    ggg  ggg gggagggggg   cccgg gcucggau  cgag g  c
||||| |||||  ||||||      || ||    |||  ||| ||||||||||   ||||| ||||||||  |||| |  u
gugag cgucg  gccucc      cg cu    ccc  ccc cccUUCUCCC   GGGUC CGAGCCUg  gcuu u  u
     a     --      -----c  a  cccc   aa   -          UCU     -        --    g ua 

Annotation confidence Not enough data

Genome context

chr9: 42960018-42960165 [+]

Mature cja-miR-615

• Accession: MIMAT0039466
• Description: Callithrix jacchus cja-miR-615 mature miRNA
• Sequence: 89 - UCCGAGCCUGGGUCUCCCUCUU - 110
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596