miRBase entry: cja-mir-205

Stem-loop cja-mir-205


Accession
MI0031991
Description
Callithrix jacchus cja-mir-205 precursor miRNA


Sequence

caauccaugugcuucucuugUCCUUCAUUCCACCGGAGUCUGUcucguacccaaccagauuucaguggagugaaguucaggaggcauggagcug
...(((((((....((((((..(((((((((((.((((((((.............)))))))).)))))))))))..)))))))))))))....

Structure
-caa       gcuu      UC           C        Ucucg 
    uccaugu    cucuug  CUUCAUUCCAC GGAGUCUG     u
    |||||||    ||||||  ||||||||||| ||||||||     a
    agguacg    gaggac  gaagugaggug cuuuagac     c
gucg       ----      uu           a        caacc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr19: 31417396-31417489 [+]

Database links

Mature cja-miR-205

Accession MIMAT0039467
Description Callithrix jacchus cja-miR-205 mature miRNA
Sequence 21 - UCCUUCAUUCCACCGGAGUCUGU - 43
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857