miRBase entry: cja-mir-146b

Stem-loop cja-mir-146b


Accession
MI0032002
Description
Callithrix jacchus cja-mir-146b precursor miRNA


Sequence

ccuggcacUGAGAACUGAAUUCCAUAGGCUGUgagcucuagcgaaugcccuauggacucaguucuggugcccgg
((.((((((.((((((((..((((((((.(((..((....))..))).)))))))).)))))))))))))).))

Structure
  u      G        AU        C   ga  u 
cc ggcacU AGAACUGA  UCCAUAGG UGU  gc c
|| |||||| ||||||||  |||||||| |||  ||  
gg ccgugg ucuugacu  agguaucc gua  cg u
  c      -        -c        c   ag  a 


Annotation confidence Not enough data
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Genome context
chr12: 89817388-89817461 [+]

Database links

Mature cja-miR-146b

Accession MIMAT0039477
Description Callithrix jacchus cja-miR-146b mature miRNA
Sequence 9 - UGAGAACUGAAUUCCAUAGGCUGU - 32
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857

  2. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596