miRBase entry: cja-mir-143

Stem-loop cja-mir-143

Accession

MI0032005

Description

Callithrix jacchus cja-mir-143 precursor miRNA

Sequence

ccugaggugcagugcugcaucucuggucaguugggagucUGAGAUGAAGCACUGUAGCUcagg
((((((.(((((((((.((((((.((((......)).)).)))))).))))))))).))))))

Structure

      g         g      u  -  ag 
ccugag ugcagugcu caucuc gg uc  u
|||||| ||||||||| |||||| || ||   
ggacUC AUGUCACGA GUAGAG cu ag  u
      G         A      U  g  gg

Annotation confidence Not enough data

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Genome context

chr2: 46850837-46850899 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-143

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-143

Accession	MIMAT0039480
Description	Callithrix jacchus cja-miR-143 mature miRNA
Sequence	40 - UGAGAUGAAGCACUGUAGCU - 59
Evidence	experimental Illumina [1-2]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857

PubMed ID: 28640911
Evolution of microRNA in primates
McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
PLoS One (2017) 12:e0176596