miRBase entry: cja-mir-34a

Stem-loop cja-mir-34a


Accession
MI0032021
Description
Callithrix jacchus cja-mir-34a precursor miRNA


Sequence

cggcugugaguguuucuuUGGCAGUGUCUUAGCUGGUUGUUgugagcaauagugaaggaagcaaucagcaaguauacugcccuagaagugcugcacguug
((((.((((((((((((..(((((((((((.((((((((((.....((....)).....))))))))))))).))))))))..))))))))).)))))))

Structure
    u   -         uU        -   A          gugag  a 
cggc gug aguguuucu  GGCAGUGU CUU GCUGGUUGUU     ca u
|||| ||| |||||||||  |||||||| ||| ||||||||||     ||  
guug cac ucgugaaga  ccgucaua gaa cgacuaacga     gu a
    -   g         uc        u   -          aggaa  g 


Annotation confidence Not enough data
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Genome context
chr7: 43621539-43621638 [-]

Database links

Mature cja-miR-34a

Accession MIMAT0039496
Description Callithrix jacchus cja-miR-34a mature miRNA
Sequence 19 - UGGCAGUGUCUUAGCUGGUUGUU - 41
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857

  2. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596