Stem-loop cja-mir-379

Accession

MI0032024

Description

Callithrix jacchus cja-mir-379 precursor miRNA

Sequence

ugguuccugaagagaUGGUAGACUAUGGAACGUAGgcguuaugguuucugaccuauguaacaugguccacuaacucucaguaucca
(((...((((.(((.((((.(((((((..(((((((((..........)).)))))))..))))))).)))).)))))))...)))

Structure

   uuc    a   a    A       GA       -  uuau 
ugg   cuga gag UGGU GACUAUG  ACGUAGg cg    g
|||   |||| ||| |||| |||||||  ||||||| ||     
acc   gacu cuc auca cugguac  uguaucc gu    g
   uau    -   a    c       aa       a  cuuu 

Annotation confidence Not enough data

Genome context

chr10: 126938792-126938877 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from cja-mir-379

Mature cja-miR-379

• Accession: MIMAT0039498
• Description: Callithrix jacchus cja-miR-379 mature miRNA
• Sequence: 16 - UGGUAGACUAUGGAACGUAG - 35
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596