miRBase entry: cja-mir-30a

Stem-loop cja-mir-30a


Accession
MI0032029
Description
Callithrix jacchus cja-mir-30a precursor miRNA


Sequence

cagugagcaacUGUAAACAUCCUCGACUGGAAGCugugaagccauagaugggcuuucagucggauguuugcagcugccuacug
(((((.(((.((((((((((((..((((((((((((((....))).....))))))))))))))))))))))).))).)))))

Structure
     a   a            UC           -----   a 
cagug gca cUGUAAACAUCC  GACUGGAAGCu     gug a
||||| ||| ||||||||||||  |||||||||||     |||  
gucau cgu gacguuuguagg  cugacuuucgg     uac g
     c   c            --           guaga   c 


Annotation confidence Not enough data
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Genome context
chr4: 69681076-69681158 [-]

Database links

Mature cja-miR-30a

Accession MIMAT0039503
Description Callithrix jacchus cja-miR-30a mature miRNA
Sequence 12 - UGUAAACAUCCUCGACUGGAAGC - 34
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857

  2. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596