miRBase entry: cja-mir-194

Stem-loop cja-mir-194


Accession
MI0032031
Description
Callithrix jacchus cja-mir-194 precursor miRNA


Sequence

ugguguuaucaagUGUAACAGCAACUCCAUGUGGAccguguaccaauuuccaguggagacgcuguuacuucugaugguuacca
(((((.(((((...((((((((..((((((.((((...((...))...))))))))))..))))))))...)))))..)))))

Structure
     -u     agU        AA      G    ccg  u 
uggug  uauca   GUAACAGC  CUCCAU UGGA   ug  
|||||  |||||   ||||||||  |||||| ||||   || a
accau  guagu   cauugucg  gaggug accu   ac  
     ug     cuu        ca      -    uua  c 


Annotation confidence Not enough data
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Genome context
chr19: 4541320-4541402 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cja-mir-194
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-194

Accession MIMAT0039505
Description Callithrix jacchus cja-miR-194 mature miRNA
Sequence 14 - UGUAACAGCAACUCCAUGUGGA - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857