miRBase entry: cja-mir-19b-2

Stem-loop cja-mir-19b-2

Accession

MI0032035

Description

Callithrix jacchus cja-mir-19b-2 precursor miRNA

Sequence

aagacauugcuacuuacaauuaguuuugcagguuugcauuucagcguauacauguauauauggcUGUGCAAAUCCAUGCAAAACUGAuugugauaauguguu
((.((((((....(((((((((((((((((((((((((...(((((((((......))))).)))))))))).)).))))))))))))))))))))))).))

Structure

  g      cuac                 -  -      uuu    -     ca 
aa acauug    uuacaauuaguuuugca gg uuugca   cagc guaua  u
|| ||||||    ||||||||||||||||| || ||||||   |||| |||||   
uu uguaau    aguguuAGUCAAAACGU CC AAACGU   GUcg uauau  g
  g      ----                 A  U      ---    g     au

Annotation confidence Not enough data

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Genome context

chrX: 122082043-122082144 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from cja-mir-19b-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-19b

Accession	MIMAT0039509
Description	Callithrix jacchus cja-miR-19b mature miRNA
Sequence	65 - UGUGCAAAUCCAUGCAAAACUGA - 87
Evidence	experimental Illumina [1-2]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857

PubMed ID: 28640911
Evolution of microRNA in primates
McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
PLoS One (2017) 12:e0176596