miRBase entry: cja-mir-26a-2

Stem-loop cja-mir-26a-2


Accession
MI0032044
Description
Callithrix jacchus cja-mir-26a-2 precursor miRNA


Sequence

ggcuguggcuggaUUCAAGUAAUCCAGGAUAGGCUguuuccaucugugaggccuauucuugauuacuuguuucuggaggcagcu
((((((..(((((..(((((((((.((((((((((..............)))))))))).)))))))))..)))))..))))))

Structure
      gg     UU         C          guuucc 
ggcugu  cugga  CAAGUAAUC AGGAUAGGCU      a
||||||  |||||  ||||||||| ||||||||||       
ucgacg  ggucu  guucauuag ucuuauccgg      u
      ga     uu         u          aguguc 


Annotation confidence Not enough data
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Genome context
chr9: 46657161-46657244 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cja-mir-26a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-26a

Accession MIMAT0039516
Description Callithrix jacchus cja-miR-26a mature miRNA
Sequence 14 - UUCAAGUAAUCCAGGAUAGGCU - 35
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857

  2. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596