miRBase entry: cja-mir-26b

Stem-loop cja-mir-26b


Accession
MI0032045
Description
Callithrix jacchus cja-mir-26b precursor miRNA


Sequence

gcccccucaccccacccugcccgggacccagUUCAAGUAAUUCAGGAUAGGUUgugugcuguccagccuguucuccauuacuuggcucggggaccggugcacugcagccuuggggugagggggc
((((((((((((((..((((((((..((((((.((((((((..(((((((((((.(......))))))))))))..))))))))))).)))..))))......))))...))))))))))))))

Structure
              -cc    ------    ga   -   U        UC           u ug 
gcccccucacccca   cugc      ccgg  ccc agU CAAGUAAU  AGGAUAGGUUg g  c
||||||||||||||   ||||      ||||  ||| ||| ||||||||  ||||||||||| |   
cgggggaguggggu   gacg      ggcc  ggg ucg guucauua  ucuuguccgac c  u
              ucc    ucacgu    ag   c   -        cc           - ug 


Annotation confidence Not enough data
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Genome context
chr6: 134777728-134777851 [+]

Database links

Mature cja-miR-26b

Accession MIMAT0039517
Description Callithrix jacchus cja-miR-26b mature miRNA
Sequence 32 - UUCAAGUAAUUCAGGAUAGGUU - 53
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857

  2. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596