Stem-loop cja-mir-197

Accession

MI0032048

Description

Callithrix jacchus cja-mir-197 precursor miRNA

Sequence

gugcuccgggggcugugccggguagagagggcagugggagguaagagcucuucacccUUCACCACCUUCUCCACCCAGCauggccggcac
(((((.....((((((((.((((.(((((((..(((((.((((((....))).))).)))))..))))))).)))).)))))))))))))

Structure

     ccggg        c    a       ca     a   -   a 
gugcu     ggcugugc gggu gagaggg  guggg ggu aag g
|||||     |||||||| |||| |||||||  ||||| ||| |||  
cacgg     ccgguaCG CCCA CUCUUCC  CACUU cca uuc c
     -----        A    C       AC     c   c   u 

Annotation confidence Not enough data

Genome context

chr7: 145498138-145498227 [+]

Mature cja-miR-197

• Accession: MIMAT0039520
• Description: Callithrix jacchus cja-miR-197 mature miRNA
• Sequence: 58 - UUCACCACCUUCUCCACCCAGC - 79
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596