miRBase entry: cja-mir-1301

Stem-loop cja-mir-1301


Accession
MI0032054
Description
Callithrix jacchus cja-mir-1301 precursor miRNA


Sequence

gggauuguggggggucgcucuaggcaccgcagcacugugcuggggaugUUGCAGCUGCCUGGGAGUGACUucacacaguccu
(((((((((.(((((((((((((((((.((((((((.......)).)))))).).))))).))))))))))).)))))))))

Structure
         g           -     - c      -  gu 
gggauugug ggggucgcucu aggca c gcagca cu  g
||||||||| ||||||||||| ||||| | |||||| ||  c
uccugacac cuUCAGUGAGG UCCGU G CGUUgu gg  u
         a           G     C A      a  gg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr14: 83171483-83171564 [+]

Database links

Mature cja-miR-1301

Accession MIMAT0039526
Description Callithrix jacchus cja-miR-1301 mature miRNA
Sequence 49 - UUGCAGCUGCCUGGGAGUGACU - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857