Stem-loop cja-mir-493

Accession

MI0032060

Description

Callithrix jacchus cja-mir-493 precursor miRNA

Sequence

gcgcucauucuggccuccagggcuUUGUACAUGGUAGGCUUUCAUUcauucguuugcacauucggugaaggucuacugugugccaggcccugugccagguaucgugu
((((....((((((...((((((((.((((((((((((((((((((.................)))))))))))))))))))).)))))))).))))))....))))

Structure

    ucau      cuc        U                    cauucgu 
gcgc    ucuggc   cagggcuU GUACAUGGUAGGCUUUCAUU       u
||||    ||||||   |||||||| ||||||||||||||||||||       u
ugug    ggaccg   gucccgga cgugugucaucuggaagugg       g
    cuau      --u        c                    cuuacac 

Annotation confidence Not enough data

Genome context

chr10: 126774437-126774543 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from cja-mir-493

Mature cja-miR-493

• Accession: MIMAT0039530
• Description: Callithrix jacchus cja-miR-493 mature miRNA
• Sequence: 25 - UUGUACAUGGUAGGCUUUCAUU - 46
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596