miRBase entry: cja-mir-133b

Stem-loop cja-mir-133b


Accession
MI0032065
Description
Callithrix jacchus cja-mir-133b precursor miRNA


Sequence

ugccccuugcucuggcuggucaaacggaaccaaguccgucuuccugagaggUUUGGUCCCCUUCAACCAGCUacagcagggcuggca
(((((((((((.((((((((..((.((.((((((.((.((((...)))))))))))).)).))..)))))))).)))))))..))))

Structure
    --       c        ca  c  a      u  g    c 
ugcc  ccuugcu uggcuggu  aa gg accaag cc ucuu  
||||  ||||||| ||||||||  || || |||||| || |||| c
acgg  gggacga aUCGACCA  UU CC UGGUUU gg agag  
    uc       c        AC  C  C      -  -    u 


Annotation confidence Not enough data
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Genome context
chr4: 53431141-53431227 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cja-mir-133b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-133b

Accession MIMAT0039535
Description Callithrix jacchus cja-miR-133b mature miRNA
Sequence 52 - UUUGGUCCCCUUCAACCAGCU - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857