Stem-loop cja-mir-497

Accession

MI0032068

Description

Callithrix jacchus cja-mir-497 precursor miRNA

Sequence

cucaacccacccgguccugcucccgcccCAGCAGCACACUGUGGUUUGUacggcacuguggccacguccaaaccacacugugguguuagagcgagggugggggaggcaccgccgagguuugg
((.((((....(((((((.((((((((((((((.((((.(((((((((.(((((......)))..)).))))))))).)))).)))).....).)))))))))))).))))....)))).))

Structure

  c    cacc    -   g         - -----    G    C         U  --   ac 
cu aacc    cggu ccu cucccgccc C     AGCA CACA UGUGGUUUG ac  ggc  u
|| ||||    |||| ||| ||||||||| |     |||| |||| ||||||||| ||  |||   
gg uugg    gcca gga ggggguggg g     uugu gugu acaccaaac ug  ccg  g
  u    agcc    c   -         a cgaga    g    c         c  ca   gu 

Annotation confidence Not enough data

Genome context

chr5: 74872164-74872285 [+]

Mature cja-miR-497

• Accession: MIMAT0039538
• Description: Callithrix jacchus cja-miR-497 mature miRNA
• Sequence: 29 - CAGCAGCACACUGUGGUUUGU - 49
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596