miRBase entry: cja-mir-383b

Stem-loop cja-mir-383b


Accession
MI0032070
Description
Callithrix jacchus cja-mir-383b precursor miRNA


Sequence

gcagcucaugcugggauccccaaaauagaggcacuauuccuuuugucuguacugggAAGUGCUUCGAUUUUGGGGAGCccugugugaguaggc
((.((((((((.(((.((((((((((.((((((((.((((.............)))))))))))).)))))))))).))).))))))))..))

Structure
  -a        u   a          a        a    uuuug 
gc  gcucaugc ggg uccccaaaau gaggcacu uucc     u
||  |||||||| ||| |||||||||| |||||||| ||||     c
cg  ugagugug ccC AGGGGUUUUA CUUCGUGA Aggg     u
  ga        u   G          G        -    ucaug 


Annotation confidence Not enough data
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Genome context
chr22: 45044259-45044351 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from cja-mir-383b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-383b

Accession MIMAT0039540
Description Callithrix jacchus cja-miR-383b mature miRNA
Sequence 57 - AAGUGCUUCGAUUUUGGGGAGC - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857