miRBase entry: cja-mir-513d-1

Stem-loop cja-mir-513d-1


Accession
MI0032073
Description
Callithrix jacchus cja-mir-513d-1 precursor miRNA


Sequence

cUUCGCAGGGAGGUGUCAUUCAUguggacuaaaucaugaaugucgccuucuugagaag
((((.((((((((((.((((((((..........)))))))).)))))))))).))))

Structure
    G          U        ugga 
cUUC CAGGGAGGUG CAUUCAUg    c
|||| |||||||||| ||||||||     
gaag guucuuccgc guaaguac    u
    a          u        uaaa 


Annotation confidence Not enough data
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Genome context
chrX: 134326196-134326253 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from cja-mir-513d-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-513d-5p

Accession MIMAT0039543
Description Callithrix jacchus cja-miR-513d-5p mature miRNA
Sequence 2 - UUCGCAGGGAGGUGUCAUUCAU - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857