Stem-loop cja-mir-5191

Accession

MI0032075

Description

Callithrix jacchus cja-mir-5191 precursor miRNA

Sequence

cugcgccuuccaaccuuggaagaguuggccaggaccccaaggccccagcacuucauccuugccguccucuccuagucugggaggauaggggagAAGACAGGAAGAAUGAAGUGCugggagcuucggggcuucccagccaacucuuccaagcccggagaccag
(((.(.((((....(((((((((((((((..(((((((.(((((((((((((((((.(((.(.(((.((((((.((((....))))..)))))).))).).))).))))))))))))).)))).))))..)))..)))))))))))))))...)))).))))

Structure

   c c    caac               ca   --    a    -             c   g c   c      -a    g 
cug g cuuc    cuuggaagaguuggc  gga  cccc aggc cccagcacuucau cuu c guc ucuccu  gucu g
||| | ||||    |||||||||||||||  |||  |||| |||| ||||||||||||| ||| | ||| ||||||  ||||  
gac c gagg    gaaccuucucaaccg  ccu  gggg uucg ggguCGUGAAGUA GAA G CAG Agaggg  uagg g
   - a    -ccc               ac   uc    c    a             A   G A   A      ga    a 

Annotation confidence Not enough data

Genome context

chr19: 23338786-23338947 [+]

Mature cja-miR-5191

• Accession: MIMAT0039544
• Description: Callithrix jacchus cja-miR-5191 mature miRNA
• Sequence: 94 - AAGACAGGAAGAAUGAAGUGC - 114
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857