Stem-loop cja-mir-9910

Accession

MI0032091

Description

Callithrix jacchus cja-mir-9910 precursor miRNA

Sequence

gaaaauggaugggaccuuaGGGGGCAAAGGCAGGAAGAGGCugagcuguccuuagccugcagccagagcccugggcauagggaccguggagcaccuaccucagcuaccuuuuugccuccgggguggccugucugcuuuc
((((.(((((((((((((.(((((((((((((((.((..(((..((.((((((((((((..((....))..))))).))))))).))..)))..)).)))..))).....))))))))))))))..)))))))).))))

Structure

    a        --     a         -----   --   A  AG   ga  u       -     ca  c 
gaaa uggauggg  accuu GGGGGCAAA     GGC  AGG AG  GCu  gc guccuua gccug  gc a
|||| ||||||||  ||||| |||||||||     |||  ||| ||  |||  || ||||||| |||||  ||  
cuuu gucugucc  ugggg ccuccguuu     ucg  ucc uc  cga  ug cagggau cgggu  cg g
    c        gg     -         uucca   ac   a  ca   gg  c       a     cc  a 

Annotation confidence Not enough data

Genome context

chr12: 2427867-2428005 [-]

Mature cja-miR-9910

• Accession: MIMAT0039559
• Description: Callithrix jacchus cja-miR-9910 mature miRNA
• Sequence: 20 - GGGGGCAAAGGCAGGAAGAGGC - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857