miRBase entry: cja-mir-616

Stem-loop cja-mir-616


Accession
MI0032095
Description
Callithrix jacchus cja-mir-616 precursor miRNA


Sequence

uagguaaaccucugcucaaaacccuccagugacuuccaugacaugaaauaggaauUCACUGGAGGAUUUUGAGCAGAggaaugaccug
(((((...(((((((((((((.((((((((((.((((((........)).)))).)))))))))).)))))))))))))....)))))

Structure
     -aaa             c          c    -  gac 
uaggu    ccucugcucaaaa ccuccaguga uucc au   a
|||||    ||||||||||||| |||||||||| |||| ||    
gucca    ggAGACGAGUUUU GGAGGUCACU aagg ua   u
     guaa             A          u    a  aag 


Annotation confidence Not enough data
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Genome context
chr9: 46342589-46342676 [-]

Database links

Mature cja-miR-616

Accession MIMAT0039563
Description Callithrix jacchus cja-miR-616 mature miRNA
Sequence 56 - UCACUGGAGGAUUUUGAGCAGA - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857