miRBase entry: cja-mir-508

Stem-loop cja-mir-508


Accession
MI0032106
Description
Callithrix jacchus cja-mir-508 precursor miRNA


Sequence

guguagggcccUACUCCAGAGGGUGUCGAUCACAuaaacuaaaacacgauugucagcuuuuugaguagaguaauacac
(((((..((.((((((.(((((.((.(((((................))))).)).))))).)))))).))..)))))

Structure
     gg  c      C     G  U     ACAuaaa 
gugua  gc cUACUC AGAGG UG CGAUC       c
|||||  || |||||| ||||| || |||||        
cacau  ug gaugag uuuuc ac guuag       u
     aa  a      u     g  u     cacaaaa 


Annotation confidence Not enough data
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Genome context
chrX: 134440155-134440232 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from cja-mir-508
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-508

Accession MIMAT0039574
Description Callithrix jacchus cja-miR-508 mature miRNA
Sequence 12 - UACUCCAGAGGGUGUCGAUCACA - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857