Stem-loop cja-mir-548x

Accession

MI0032110

Description

Callithrix jacchus cja-mir-548x precursor miRNA

Sequence

gaaaaggaaauauuagguuggugcAAAAGUAAUUGCGAGUUUUACCauuaaaaguaauuaaaaguaauggcaaagcaugcaauuacuuuugcaccaaugcaauagauucuaaguc
....((((..((((..(((((((((((((((((((((.(((((.((((((..............)))))).))))).)))))))))))))))))))))..))))..)))).....

Structure

-gaaa    aa    ag                     A     A      aaagua 
     agga  uauu  guuggugcAAAAGUAAUUGCG GUUUU CCauua      a
     ||||  ||||  ||||||||||||||||||||| ||||| ||||||       
     ucuu  auaa  uaaccacguuuucauuaacgu cgaaa gguaau      u
cugaa    ag    cg                     a     c      gaaaau 

Annotation confidence Not enough data

Genome context

chr2: 78686770-78686884 [+]

Mature cja-miR-548x

• Accession: MIMAT0039577
• Description: Callithrix jacchus cja-miR-548x mature miRNA
• Sequence: 25 - AAAAGUAAUUGCGAGUUUUACC - 46
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857