miRBase entry: cja-mir-548d-1

Stem-loop cja-mir-548d-1


Accession
MI0032114
Description
Callithrix jacchus cja-mir-548d-1 precursor miRNA


Sequence

aagguugguacAAAAGUAAUUGUGGUUUUGGCCauugcuuuuaauggcaauaaaugcaguuacuuuuguaucaaucuu
((((((((((((((((((((((((......(((((((....)))))))......))))))))))))))))))))))))

Structure
                        GUUUUG       c 
aagguugguacAAAAGUAAUUGUG      GCCauug u
||||||||||||||||||||||||      |||||||  
uucuaacuauguuuucauugacgu      cgguaau u
                        aaauaa       u 


Annotation confidence Not enough data
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Genome context
chr5: 34075067-34075144 [+]

Database links

Mature cja-miR-548d

Accession MIMAT0039579
Description Callithrix jacchus cja-miR-548d mature miRNA
Sequence 12 - AAAAGUAAUUGUGGUUUUGGCC - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857