miRBase entry: cja-mir-302b

Stem-loop cja-mir-302b


Accession
MI0032122
Description
Callithrix jacchus cja-mir-302b precursor miRNA


Sequence

ugggcucccuucaACUUUAACAUGGAAGUACUUUCugugacuuuaaaaguaagugcuuccauguuuuaguagaagugaaucca
((((.((.((((.(((..(((((((((((((((.((...........)).)))))))))))))))..))).)))).)).))))

Structure
    c  c    a   UU               U  guga 
uggg uc cuuc ACU  AACAUGGAAGUACUU Cu    c
|||| || |||| |||  ||||||||||||||| ||    u
accu ag gaag uga  uuguaccuucgugaa ga    u
    a  u    a   uu               u  aaau 


Annotation confidence Not enough data
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Genome context
chr3: 80984411-80984493 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from cja-mir-302b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-302b

Accession MIMAT0039588
Description Callithrix jacchus cja-miR-302b mature miRNA
Sequence 14 - ACUUUAACAUGGAAGUACUUUC - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857