Stem-loop cja-mir-208a-1

Accession

MI0032132

Description

Callithrix jacchus cja-mir-208a-1 precursor miRNA

Sequence

uuccugugacgggcgagcuuuuggcccggguuauaccugaugcucacguAUAAGACGAGCAAAAAGCUUGUuggucagaggag
.((((.((((.(((((((((((.((.((..((((((.(((...))).))))))..)).)).))))))))))).)))).)))).

Structure

u    g    g           g  c  gg      c   u 
 uccu ugac ggcgagcuuuu gc cg  uuauac uga  
 |||| |||| ||||||||||| || ||  |||||| ||| g
 agga acug uUGUUCGAAAA CG GC  AAUAug acu  
g    g    g           A  A  AG      c   c 

Annotation confidence Not enough data

Genome context

chr10: 47444908-47444990 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cja-mir-208a-1

Mature cja-miR-208a

• Accession: MIMAT0039597
• Description: Callithrix jacchus cja-miR-208a mature miRNA
• Sequence: 50 - AUAAGACGAGCAAAAAGCUUGU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857